Open and Reproducible Research: Tools
Pablo H.Cerdan
PhD. Student in Biophysics
IFS Computing Support
phcerdan
p.hernandezcerdan@massey.ac.nz
Tools
Bibliography Manager:
Zotero
Collaborative \(\LaTeX\):
Overleaf
,
ShareLatex
Version controlling repositories:
Github
Reproducible research:
jupyter notebooks
Bibliography Manager
\(\LaTeX\) in the cloud
Version Controlling
Literate Programming
Jupyter Notebooks
R notebooks
LaTeX listings
Any format where you can live-code and work with the output
CoCalc: Try it in the cloud
https://cocalc.com
Massey Study Group
https://masseystudygroup.github.io/
Thanks!